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m3ha_optimizer4gabab

Single Neuron Fitting

Metadata for Important Single Neuron Fitting Runs

Last Updated 2020-01-23 by Adam Lu


Run Name Fitting Mode Build Mode # of traces used Region fitted Averaged Sweeps with Same vHold Corrected Large DC steps Excluded Problematic Sweeps # of initial conditions Initial Simplex Mode Initial params Error weights (sweep-match-amp-time-slope) LTS Match Error LTS Amp Unc Error tolerance Server
singleneuronfitting14 3 auto 12 [3000, 10000] No No Yes 1 0 Destexhe 3:-:1:2:3 20 baseNoise 0.01 fishfish
singleneuronfitting16 3 auto 12 [3000, 10000] No No Yes 1 0 Destexhe 3:-:1:2:3 20 baseNoise 0.01 rivanna
singleneuronfitting18 3 auto 12 [3000, 10000] No No Yes 1 0 Destexhe 3:-:1:2:3 20 baseNoise 0.01 rivanna
singleneuronfitting20 3 auto 12 [3000, 10000] No No Yes 12 0 Destexhe 3:-:1:2:3 20 baseNoise 0.1 fishfish
singleneuronfitting21 3 auto 60-180 [3000, 10000] No No Yes 12 0 Destexhe 3:-:1:2:3 20 baseNoise 0.01 rivanna
singleneuronfitting22 1 passive 60-180 [3000, 10000] Yes Omit Yes 12 0 Destexhe 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting23 1 passive 60-180 [3000, 10000] Yes No Yes 12 0 Destexhe 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting24 1 passive 60-180 [3000, 10000] Yes No Yes 100 0 Destexhe 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting30 1 passive 60-180 [3000, 10000] Yes Yes Yes 100 0 Destexhe 1:-:0:0:0 20 baseNoise 0.001 fishfish
singleneuronfitting31 1 passive 60-180 [3000, 10000] Yes Yes Yes 100 0 Destexhe 1:-:0:0:0 20 baseNoise 0.001 rivanna
singleneuronfitting36 1 passive 12 [3000, 10000] No Yes Yes 12 0 Destexhe 1:-:0:0:0 20 baseNoise 0.001 fishfish
singleneuronfitting37 1 passive 60-180 [3000, 10000] Yes Yes Yes 12 0 Destexhe 1:-:0:0:0 20 baseNoise 0.001 fishfish
singleneuronfitting39 1 passive 60-180 [3000, 10000] After Yes Yes 12 0 Destexhe 1:-:0:0:0 20 baseNoise 0.001 fishfish
singleneuronfitting41 (simplified geometry) 1 passive 60-180 [3000, 10000] Yes Yes Yes 12 0 Curve Fit 1:-:0:0:0 20 baseNoise 0.001 fishfish
singleneuronfitting44 1 passive 60-180 [3000, 10000] Yes Yes No 1 0 Curve Fit 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting49 1 passive 60-180 [3000, 10000] Yes Yes No 1 0 Curve Fit 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting52 1 passive 60-180 [3000, 10000] Yes Yes No 1 0 Curve Fit 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting57 1 passive 60-180 [3000, 10000] Yes Yes No 1 0 Curve Fit 1:-:0:0:0 20 baseNoise 0.01 fishfish
singleneuronfitting59 2 active 12 [3000, 10000] No No Yes 1 0 Passive: from 57; Active: No channels active 1:2:-:-:- 20 baseNoise 0.1 fishfish
singleneuronfitting60 2 active 12 [3000, 10000] No No Yes 1 0 Passive: from 57; Active: Destesxhe 1:2:-:-:- 20 baseNoise 0.1 fishfish
singleneuronfitting61 2 active 12 [3000, 10000] No No Yes 1 0 Passive: from 57; Active: from 60 3:-:1:2:3 20 baseNoise 0.1 fishfish
singleneuronfitting62 2 active 12 [3000, 10000] No No Yes 1 0 Passive: from 57; Active: from 61 11:-:2:8:12 100 baseNoise 0.1 fishfish
singleneuronfitting63 2 active 12 [3000, 10000] No No Yes 1 0 Best of 60-62 1:-:3:2:1 20 peakProm 0.1 fishfish
singleneuronfitting72 2 active 12 [3000, 10000] No No Yes 1 0 Best of 60-63 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting73 2 active 12 [3000, 10000] No No Yes 1 0 Best of 60-63, 72 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting74 2 active 12 [3000, 10000] No No Yes 1 0 Best of 60-63, 72-73 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting75 2 active 12 [3000, 10000] No No Yes 1 1 Best of 60-63, 72-74 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting76 5 active 12 [3000, 10000] No No Yes 1 0 Best of 60-63, 72-75 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting78 6 active 12 [3000, 10000] No No Yes 1 0 Best of 60-63, 72-76 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting85 2 active 12 [3000, 10000] Yes Yes Yes 1 0 Best of 60-63, 72-78, passive replaced by Curve Fit 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting86 2 active 12 [3000, 10000] Yes Yes Yes 1 0 Best of 85 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting87 2 active 12 [3000, 10000] Yes Yes Yes 1 0 Best of 85-86 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting88 9 passive 60-180 [3000, 10000] Yes Yes Yes 1 0 Curve Fit 1:0:0:0:0 18:6 peakProm 0.01 fishfish
singleneuronfitting90 6 active 12 [3000, 10000] Yes Yes Yes 1 0 Best of 60-63, 72-78, 85-86, epas replaced by -70 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting91 5 active 12 [3000, 10000] Yes Yes Yes 1 0 singleneuronfitting90 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting92 10 active 12 [3000, 10000] Yes Yes Yes 1 0 singleneuronfitting91 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting94 5 active 12 [3000, 10000] Yes Yes Yes 1 0 D101310 from 92 1:3:1:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting95 5 active 12 [3000, 4800] Yes Yes Yes 1 0 best of 93 and 94 1:6:5:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting97 5 active 12-20 [3000, 4800] Yes Yes Yes 1 0 best of 0-95 1:6:5:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting98 5 active 16 [3000, 4800] Yes Yes Yes 1 0 G101310 from 97 1:6:5:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting99 5 active 12 [3000, 4800] Yes Yes Yes 1 0 best of 0-97 1:6:5:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting101 5 active 12 [3000, 4800] Yes Yes Yes 1 0 B101310 from 99 1:6:5:1:1 18:6 peakProm 0.1 fishfish
singleneuronfitting102 5 active 12 [3000, 4800] Yes Yes Yes 1 0 singleneuronfitting101 1:6:5:1:1 18:6 peakProm 0.1 fishfish